NO02G04940, NO02G04940 (gene) Nannochloropsis oceanica

Overview
NameNO02G04940
Unique NameNO02G04940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2393
Alignment locationchr2:1324842..1327234 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1324842..1327234 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G04940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04940.1NO02G04940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04940.1NO02G04940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04940 ID=NO02G04940|Name=NO02G04940|organism=Nannochloropsis oceanica|type=gene|length=2393bp
ATGGGCTCGAGAGCAGTGTCACAGCCAGGAACGCCGACAGCTGGAGGGGG
AGGAGGGGGAGGAGGGGGAGGAATAAGAGGATTTGAGCTGCAGCAACAGC
AGCAGTACATCCACCCGCAGCAGCAGCAACAACAACAAACAAGGAGAAAA
CAGCAACAGCCTTTCCCGCAGGAGCAGCAGCAGCAGCAGCAGAACGCCCA
GCAGCAACAACACTACCAACACCAGCACCCCTTTCAGGGGGGGCGTCCGC
AACAGCAGCAACAACAACAACTGCAGTACCATCACCTGCAGCTGCCGCAG
CAGCACCAGCAGCATCAGCAACTATATACAGCCCAATCGCAGGTGTCTTC
TCCAGGCTCGGGGAAGAAGAAGAAGGGGGGGGGAAGCGGGCAGGGTCATC
ATCATCAGCAGCAGCAGCTACCACAACCACAAGCACCTCCTCAACATCAA
CAGGTGCAGCAGCAACAAGGACAATCAAAACCAGCTCCTCCTCAACCGAG
CGGCAGCGGCGGCAAGCCTGCGACGTCAACGACAGCACCAGCCCTCCCTC
CTGGCAGCTCTGCTACCGTGGGTCTTGATCTCGCCAGCAGCAGCAGCAGC
AGCACCAATGGGAGGGCGGCCAAAGCATCCGTCACGGAAGGAGGAGGAGG
AGGATGCGAGGGAGGGGTAAAGGGCGCAGCGTCTTCCGCTGTTAGTGCCA
GTGGGGTGAGCGGCGAGGCCGGCACCGCTGCACCGAAGAAGAGCAAAAAC
AAGAAGAAGTCCCAGCAGCAACAGCAACAACAGCAGCAGGGTGGAGCACC
TGTGCCTGCCCCTCAGCCTCCTGTCGTGATCAGTCTAAGCCAGGACAATT
TTCCTCCTCTTTCCAGCCCTGGTGGTTCCTCCCTCCCTCTTTCAACTCTT
ATCGACGGCACAGGGGTAGGCGGAGGAGAAACCACGGCGCAAAAGCTCGC
TACTTTCCATGCCGCGTCCTCCGCCGTGCTTTCTGCTCCGTCGTCCTCCT
CTCATGTCTACAAGCCAGCAGTATTAACGCCACCATCATCGTCAACCACA
GTTTGGAAGGAGGGCGGGAAGGAGGAGAGCGGGGTGACAACAAGTGCTGC
CGCAGGGGCTCCAGTGCCGAATGAAACATCTGCTGCCGGGCCTTCAACTC
AAGCTTCTTCTTCTGGAAAATCACCAGCAGGATCGGCAGCAGGAGGAGCG
GTCGGCAAGACCGAGGAGGAGGGTGTCAAGACGACTGTAGCACCAGCACC
AGAAAAAGCTACCTTCAGTATTACTTCTCCCTCCACCTCCTCCATTGCCA
CGAGTAGCAGCAGCAGCTCTCACTCAATCCTTTCCTCCCCTAGACCTGCA
CCAGCAGCAGCGCCTGCTGCAGGATCCCCCACACCGAAGGGGCCGTGGGC
AGCGGCTGTCCTCAGGGGTCCCACACTAAGCGATCCTCACGTCCCTGTAC
GATTACCCCTAAGATCAGCCACTCCTGCGTCTACAACGGCCAGCAGCAGC
AGTAGCAGTAGCAGCAGCAGTAGCAGCAGCAGCAACAGCAACAGCAACAA
CAACAACAACAACAAAAACGCCACCACCGCCGCCGTTACCACCAGCACCA
GCTCCAGCACCAGCGGTGCGGCCACGGGCCTTGATGGGAGTGGAGGGCCG
TCTGTGGCGGCCACAGCACCTTCCACTGGGGAGGGTAGAAGTGCCATAGG
GGGCGGGAGTGGGGGTGGAGGTGGAGGAGATGAAGGAGAGAAAAAAGCTG
TGGGAAATGGAACTACTGCAAAGgtaatgtagaaggttttgagggaggga
aaggaggaagcaggatggaggggtgaagagatggaaccaggccataatga
tgtctcgttgttttaatttatgagtcgatgccttttccacggcgatcggt
gaattttatgtatttgtactgtctgaaggccacacaccatcttcccatcc
acctcttcctccctcccttctctttcctgagtttgttttcatactcgctg
tatctctctctctctctctctctctctctttctctctctctctctctttc
tctctctcacgcacacacacacacacacacacacacacacacgaacgctt
atacacgtatacactctcacatacatacctttctgctcttttctccccct
accttatagGACGACAGCAAAGTTTTCGCCGACGCTGGATTGACAACCAA
GTCAGGCAAATCGGCCTCTGTCAATGCCCCCTTATCCTCCTCCTCCTCCT
CTCCACGCATGTCTTCCACTACCCCTCCCTCGGCGGTGCCTATAGCCGGC
AAGGGCCCATGGGGGAAGAAGAGTTTTGTGGAGGTGGTACGAACGATGGG
AGGGGTAGGAGAGGGAGGAGAGAAGGGGGGTGGAGAAAAGTAG
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protein sequence of NO02G04940.1

>NO02G04940.1-protein ID=NO02G04940.1-protein|Name=NO02G04940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=669bp
MGSRAVSQPGTPTAGGGGGGGGGGIRGFELQQQQQYIHPQQQQQQQTRRK
QQQPFPQEQQQQQQNAQQQQHYQHQHPFQGGRPQQQQQQQLQYHHLQLPQ
QHQQHQQLYTAQSQVSSPGSGKKKKGGGSGQGHHHQQQQLPQPQAPPQHQ
QVQQQQGQSKPAPPQPSGSGGKPATSTTAPALPPGSSATVGLDLASSSSS
STNGRAAKASVTEGGGGGCEGGVKGAASSAVSASGVSGEAGTAAPKKSKN
KKKSQQQQQQQQQGGAPVPAPQPPVVISLSQDNFPPLSSPGGSSLPLSTL
IDGTGVGGGETTAQKLATFHAASSAVLSAPSSSSHVYKPAVLTPPSSSTT
VWKEGGKEESGVTTSAAAGAPVPNETSAAGPSTQASSSGKSPAGSAAGGA
VGKTEEEGVKTTVAPAPEKATFSITSPSTSSIATSSSSSSHSILSSPRPA
PAAAPAAGSPTPKGPWAAAVLRGPTLSDPHVPVRLPLRSATPASTTASSS
SSSSSSSSSSSNSNSNNNNNNKNATTAAVTTSTSSSTSGAATGLDGSGGP
SVAATAPSTGEGRSAIGGGSGGGGGGDEGEKKAVGNGTTAKDDSKVFADA
GLTTKSGKSASVNAPLSSSSSSPRMSSTTPPSAVPIAGKGPWGKKSFVEV
VRTMGGVGEGGEKGGGEK*
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Synonyms
Publications