NO03G05790, NO03G05790 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G05790 vs. NCBI_GenBank
Match: ARF12494.1 (hypothetical protein Klosneuvirus_6_56 [Klosneuvirus KNV1]) HSP 1 Score: 117.1 bits (292), Expect = 1.000e-22 Identity = 77/238 (32.35%), Postives = 121/238 (50.84%), Query Frame = 0
Query: 54 SKSMVPSNTTVVVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGNNIPVSNVLQVVDTPTDGDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHDIPGYETTKFE-RGAVSSLRKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQW--ALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRKWGAEVTVPRFTR 289
SKS + ++ +VIYPE+I+G VRW+L VGI+ + I +W +DDLVF+Y+T P + Q+ + + + + + RSG +M+RKG ++H I+ +H K + + EYF YDPY+++ AA+ G + I+YPL N +K W G F Q NL+ G+AYG E EIEYA+ T+H + +G E T+ +F +
Sbjct: 73 SKSQIINDENTIVIYPEIIKGNPLNAKYVVRWLLCDVGIHTDKEIYKTWGKDDLVFHYSTFNMKYNP-EKITQLYTIWINPNVKNTNPTE----QRSGSCYMIRKGNQFHKTIKNMHPSDSILLDKNSLEDNIKIFNEKEYFYCYDPYSFYDSIAALCGCIPIIYPLENSNKLDWLKTKGLFQVYLNQRDNLS---GIAYGNEPIEIEYAKNTLHLASQEKQDALNFGLE-TIKKFVK 301
BLAST of NO03G05790 vs. NCBI_GenBank
Match: WP_100901448.1 (methyltransferase type 11 [Nostoc flagelliforme]) HSP 1 Score: 115.2 bits (287), Expect = 3.800e-22 Identity = 82/269 (30.48%), Postives = 135/269 (50.19%), Query Frame = 0
Query: 52 NNSKSMVPSNTTVVVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYAT-STGNNIPVSNVLQVVDTPTDGDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIH--DIPGYETTKFERGAVSSLRKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRKWGAEVTVPRFTRDCFR---FKQGERKFFESALILE--DVYS 313
+N + N VV+YPEVI G VRWIL +G++ +I SW +DD V++Y+T + ++ N+L +PT + + + R+G ++RKG K+H + IH D + + + EY +SYDPY+Y ++ AA+ G + IV P+ +K QW F+ L+ E+ G+AYG E E+EYAR+T+ ++R+ ++G + TV F D K K ++A IL+ D++S
Sbjct: 59 DNYATKAEINEHTVVVYPEVIFGNPLNAKHVVRWILCELGVHCPHDIYTSWGKDDFVYHYSTYNPQKDVKNYNIL----SPTYLNPA----LQNHGKSRNGTCHIIRKGHKFHKPLLHIHPSDSLLLDDNLSQEVLIEIFNIKEYLISYDPYSYINFMAALCGCIPIVVPIKETTKKQWLESLFMSISLEQSGQNELKGIAYGLE--EVEYARKTLQEVRNQQDIFIQYGKD-TVHSFINDMISRLCAKSDLEKLSKNAHILQIVDIFS 316
BLAST of NO03G05790 vs. NCBI_GenBank
Match: WP_096535992.1 (hypothetical protein [Nostoc linckia] >BAY75682.1 putative glycosyltransferase [Nostoc linckia NIES-25]) HSP 1 Score: 109.0 bits (271), Expect = 2.700e-20 Identity = 70/233 (30.04%), Postives = 115/233 (49.36%), Query Frame = 0
Query: 61 NTTVVVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYAT-STGNNIPVSNVL-QVVDTPTDGDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHDIPG--YETTKFERGAVSSLRKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRKWGAEVTVPRFTRD 290
N VV+YPEV G VRWIL +GI+ +I +W +DD +++Y T ++ ++ N++ + P + + R G ++RKG K+HN +++IH + + + + EY +SYDPY+Y AA+ G + I+ P+A +K +W L++ +I G AYG E E+EYAR T+ ++R K+G E +V RF D
Sbjct: 68 NDNTVVVYPEVTFGNPLKAQYVVRWILCELGIHCPSDIYTTWGKDDFIYHYGTYNSQKDVKDYNLICPIYINPALKN---------YGKSRDGYCHIIRKGHKFHNPLKYIHPSESLFLDDNLSQEILIEIFNRKEYLISYDPYSYICAIAALCGCIPIIVPIAGTTKEEWFKSLSASVILEESGECKIKGFAYGLE--EVEYARNTLQEVRYQQEIQVKYGKE-SVSRFIND 288
BLAST of NO03G05790 vs. NCBI_GenBank
Match: KKP72070.1 (hypothetical protein UR68_C0021G0002 [Candidatus Roizmanbacteria bacterium GW2011_GWA2_35_19]) HSP 1 Score: 100.1 bits (248), Expect = 1.300e-17 Identity = 65/232 (28.02%), Postives = 114/232 (49.14%), Query Frame = 0
Query: 52 NNSKSMVPSNTTVVVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGNNIPVS-NVLQVVDTPTDGDETDISDEDFNN--RDRSGIAWMMRKGPKYHNEIEFIHDIPG--YETTKFERGAVSSLRKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRKWG 279
NN ++ + + +V+YPEVI G VRW+L +GI+ +++I +W+ DLVF+++T N P N L + D N + RSG ++ +K +H I+ IH + +E + K EYF YDPY++++ AA+ G + I+YP+A ++K W L T + PG++YG + +I YA++T+ + + ++G
Sbjct: 57 NNFAKLIDIDDSTIVVYPEVIEGNPLKAKKVVRWLLCDLGIHCSKDIYKTWSTTDLVFHFSTFNANYDPFKINYLYTI----------WIDPKVKNLKQKRSGSCYLYKKASLFHKNIKLIHPKNSLLIDNLNYEE-IIKVFNKKEYFYCYDPYSFYNSIAALCGCIPIIYPIAGITKLNW-LKTLAKFQPYLKTHENFPGISYGID--DILYAKKTIKNVEKVYSEVVEYG 274
BLAST of NO03G05790 vs. NCBI_GenBank
Match: KKP66667.1 (hypothetical protein UR63_C0029G0005 [Candidatus Roizmanbacteria bacterium GW2011_GWC2_35_12]) HSP 1 Score: 99.8 bits (247), Expect = 1.600e-17 Identity = 64/232 (27.59%), Postives = 114/232 (49.14%), Query Frame = 0
Query: 52 NNSKSMVPSNTTVVVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGNNIPVS-NVLQVVDTPTDGDETDISDEDFNN--RDRSGIAWMMRKGPKYHNEIEFIHDIPG--YETTKFERGAVSSLRKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRKWG 279
NN ++ + + +++YPEVI G VRW+L +GI+ +++I +W+ DLVF+++T N P N L + D N + RSG ++ +K +H I+ IH + +E + K EYF YDPY++++ AA+ G + I+YP+A ++K W L T + PG++YG + +I YA++T+ + + ++G
Sbjct: 57 NNFAKLIDIDDSTIIVYPEVIEGNPLKAKKVVRWLLCDLGIHCSKDIYKTWSTTDLVFHFSTFNANYDPFKINYLYTI----------WIDPKVKNLKQKRSGSCYLYKKASLFHKNIKLIHPKNSLLIDNLNYEE-IIKVFNKKEYFYCYDPYSFYNSIAALCGCIPIIYPIAGITKLNW-LKTLAKFQPYLKTHENFPGISYGID--DILYAKKTIKNVEKVYSEVVEYG 274
BLAST of NO03G05790 vs. NCBI_GenBank
Match: WP_066403330.1 (hypothetical protein [Arcobacter cryaerophilus]) HSP 1 Score: 77.0 bits (188), Expect = 1.100e-10 Identity = 65/235 (27.66%), Postives = 114/235 (48.51%), Query Frame = 0
Query: 64 VVVIYPEVIRG-ALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGNN---IPVSNVLQVVDTPTDGDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHDIPGYETTKFERGAVSSL-RKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRKWGAEVTVPRFTRDCFRF 294
++V+Y E++ G LE+ +I VRW+L G + N ++ +D +F Y + I N L + TD S +FN DR G M+RKG N + IH ++ + + +YF+SYD YT++S +AA+ G +SIV P ++K +W + + G+AYG++ +IEYA+ T HK+ +++ ++ + +V F C ++
Sbjct: 88 IIVVYSEIVDGNPLELKNI-VRWLLHKPGFH---NGKINFGENDFIFGYGEKFSTSEYPIKEINTLYLTYIMTD----IYSQTNFN--DRQGSCHMIRKG----NNKKSIHPKDSLLVDGMTHEELNKIFNEKKYFISYDSYTFYSIYAALCGCISIVVPEEGITKEKW-----------HPKIEDRYGLAYGFD--DIEYAKDTKHKMIRYIIEQQELNLK-SVKHFVEACKKY 294
BLAST of NO03G05790 vs. NCBI_GenBank
Match: WP_004902141.1 (hypothetical protein [Acinetobacter brisouii] >ENV46914.1 hypothetical protein F954_01708 [Acinetobacter brisouii ANC 4119] >ESK47666.1 hypothetical protein P255_02940 [Acinetobacter brisouii CIP 110357]) HSP 1 Score: 74.3 bits (181), Expect = 7.400e-10 Identity = 69/231 (29.87%), Postives = 113/231 (48.92%), Query Frame = 0
Query: 54 SKSMVPSNTTVVVIYPEVI-RGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATS-----TGNNIPVSNVLQVVDTPTD-GDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHDIPGYETTKFERGAVSSL-RKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNLRK 277
+K +PS T VVIYPE+ LEI ++ VRW+L G + + ++ ++L F + ++ N+ N L+V+ P D + T+ + D + +M+RKG + +FIHD + +S + R+ + F+ YD YT +S FA + G SIV P NVS W N ++ G+AYG E+++E+AR T HK+ ++N K
Sbjct: 82 NKINIPS--TGVVIYPEITENNPLEIKNV-VRWLLHQPGFHTGQ---INYGENELYFKFNSAIKDFKNKNSFLSKNELKVIYYPIDIYNATNTTARDIES------CYMVRKG----DYKKFIHDENSIQLDGKTHTEISVIFRRAKRFICYDDYTAYSIFAILCGCESIVVPGENVSIDSWY-----------PNESDRFGIAYGITENQLEWARSTQHKVLEHVINEHK 285
BLAST of NO03G05790 vs. NCBI_GenBank
Match: WP_102571986.1 (WavQ [Vibrio splendidus] >PMN78475.1 WavQ [Vibrio splendidus]) HSP 1 Score: 73.9 bits (180), Expect = 9.700e-10 Identity = 64/240 (26.67%), Postives = 105/240 (43.75%), Query Frame = 0
Query: 37 WELYFSLVAHGFSAANNSKSMVPSNTTV--------VVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGNNIPVSNVLQVVDTPTDGDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHDIPGYETTKFERGAVSSL-RKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKL 268
++ Y L GFS NN P + +++YPE+ G VRW L G E +++ +L + + ++ N + L + TDI + D + +R+G+ +M+RKG IHD E ++ + ++ + F+SYD YT +S FA + G SIV P NV+K QW Y + ++ G+AYG E E+ +A T K+
Sbjct: 57 FKTYLFLKKEGFSYKNNENFETPIRRVISKDDLLDSIIVYPEITSGNPLNAKNVVRWFLHQPGHFTNE---VNYSPGELYYKFNSAIKNFELYKSKLSTSELKVIHYPTDIYNNDLCDTERAGVCYMVRKG----GHKSKIHDSNAICIDGMEHHKIAEVFKRSKKFISYDDYTAYSIFANLCGCESIVVPDENVTKEQW--------YPLE---SDRYGIAYGTSEEELTWANETRPKV 278
BLAST of NO03G05790 vs. NCBI_GenBank
Match: OJQ86785.1 (hypothetical protein BK370_19705 [Escherichia coli]) HSP 1 Score: 71.2 bits (173), Expect = 6.300e-9 Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 0
Query: 65 VVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGNNIPVSNVLQVVDTPTDGDETDI--SDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHDIP-GYETTKFERGAVSSL-RKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMH 266
VVIYPE++ G VRW L G + N+ + + +Y T N + + + DI +D N R+G A+ MRKG E HD+ Y ++S+ ++ +YF SYDPYT + WFA M G + +V P NV+K +W N + G+AYG + +IEYAR+T H
Sbjct: 9 VVIYPEIVNGNPLRAKNVVRWFLHNPGFHTG-NV--KYGTREFYISYKTFGRNFSNQYSYMARTELTITHYLNDIYNTDSTICNELRTGSAYCMRKGKGRTIE----HDLTNSYLIDGLSHHEIASIFKEVKYFFSYDPYTAYFWFAIMCGCIPVVIPNENVTKEEWY-----------PNEEDRFGIAYGID--DIEYARKTRH 193
BLAST of NO03G05790 vs. NCBI_GenBank
Match: WP_045494475.1 (hypothetical protein [Vibrio hyugaensis]) HSP 1 Score: 68.2 bits (165), Expect = 5.300e-8 Identity = 70/227 (30.84%), Postives = 104/227 (45.81%), Query Frame = 0
Query: 61 NTTVVVIYPEVIRGALEIGDIHVRWILAAVGINVAENITDSWNRDDLVFNYATSTGN-NIPVS----NVLQVVDTPTDGDETDISDEDFNNRDRSGIAWMMRKGPKYHNEIEFIHD--------IPGYETTKFERGAVSSLRKFEYFVSYDPYTYWSWFAAMQGTVSIVYPLANVSKAQWALGTFVGSYLQDQNLTEIPGVAYGWEESEIEYARRTMHKLRSFLVNL 275
N + VV+Y E+ G + VRW L G ++ ++I + + +L F Y ++ + P S +L+V+ PTD E D DR +M+RKG FIHD + ET K L++ + F+ YD YT +S FA + G SIV P VSK W V Y G+AYG +ESE+E+AR T+ L+ + +L
Sbjct: 89 NKSSVVVYSEIAFGNPLNANNIVRWYLHHPG-HIIKDI--FYTKGELCFRYHSAISDFTYPESKLSETILKVMYFPTDIYEID------KEVDRDISTYMVRKG----KSKPFIHDPSFVCVDGLSHIETAKL-------LKRSKRFICYDDYTAYSHFAVLSGAESIVVPEDGVSKEAW-FPDEVSRY----------GIAYGTDESELEWARETVPMLKERIESL 284 The following BLAST results are available for this feature:
BLAST of NO03G05790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following mRNA feature(s) are a part of this gene:
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05790 ID=NO03G05790|Name=NO03G05790|organism=Nannochloropsis oceanica|type=gene|length=4159bpback to top protein sequence of NO03G05790.1 >NO03G05790.1-protein ID=NO03G05790.1-protein|Name=NO03G05790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top protein sequence of NO03G05790.2 >NO03G05790.2-protein ID=NO03G05790.2-protein|Name=NO03G05790.2|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top protein sequence of NO03G05790.3 >NO03G05790.3-protein ID=NO03G05790.3-protein|Name=NO03G05790.3|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top protein sequence of NO03G05790.4 >NO03G05790.4-protein ID=NO03G05790.4-protein|Name=NO03G05790.4|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top protein sequence of NO03G05790.5 >NO03G05790.5-protein ID=NO03G05790.5-protein|Name=NO03G05790.5|organism=Nannochloropsis oceanica|type=polypeptide|length=353bpback to top protein sequence of NO03G05790.6 >NO03G05790.6-protein ID=NO03G05790.6-protein|Name=NO03G05790.6|organism=Nannochloropsis oceanica|type=polypeptide|length=353bpback to top protein sequence of NO03G05790.7 >NO03G05790.7-protein ID=NO03G05790.7-protein|Name=NO03G05790.7|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top protein sequence of NO03G05790.8 >NO03G05790.8-protein ID=NO03G05790.8-protein|Name=NO03G05790.8|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top protein sequence of NO03G05790.9 >NO03G05790.9-protein ID=NO03G05790.9-protein|Name=NO03G05790.9|organism=Nannochloropsis oceanica|type=polypeptide|length=353bpback to top Synonyms
Publications
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