NO04G03030, NO04G03030 (gene) Nannochloropsis oceanica

Overview
NameNO04G03030
Unique NameNO04G03030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2994
Alignment locationchr4:811745..814738 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:811745..814738 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03030.1NO04G03030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03030.1NO04G03030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03030 ID=NO04G03030|Name=NO04G03030|organism=Nannochloropsis oceanica|type=gene|length=2994bp
AGATACTTGTTGTGCCCGGGCGCCATTCCACCATAGCGTCTTCTTGATAA
TCAAATCCACCACCCCCTCCAACCGACCCACCCAGCCCCCCATCAGCATC
AGTGAAGGACCCATTCAAGCTTCTTGGCATCGAGGAGGAAGGACCCGATG
GCGCTGATGTGGGCTACGGCTACCTGTGTGATGAACTTACTATAAACCCA
CGGAAAAGTGACCTGATCTGCAAGACATGCAGACCCGAATTTCTTGTGTT
GTGGCAGCAGCAGATGGATCCACGGCCGGGGAAGCCGCGGCAGTTGAACA
AGGGCACCCTCCGAACCCACATGAAAAATTAGAGTGCATGGCCTCCTCGT
AGGGGCTGCTAAGAATAGGAGGAAGAGGGCCGTGTACAATTCCTGAAGCC
GGTGGAGAAGTCACAGCAGCGGCACCAGCACCAGCAGCGACGGGGCGATA
GAGGGGGCGATTGTGATGATGATGACGAGGAGGACGACGAGGAAGACGAG
CAACAACAACAGCAGCAGCAATCATCACCATCAGCAACTTCTCTTGCAGC
TTTTTTTTCTCCTACTGACAACATTTCTTGGAAGCTCTGCAGAGGCATTT
CGACGACCGGCCCCGTTGAGTAGGGTTGTAGACCCCGACAGCTGGGGGCT
CCAAAACATATCTGCGAGACGTTCCTCTGTCTTACCCCAATACCTCCATA
TTCAACATTCGGTTGGTCCATTGCATCGAAATCTCCACCCAAGGATTTTA
CGCCAAAAAGCATGGATCTTCGAAGGATTGCCATGTGGTAGTGAGCAGGA
AGGAGGAGACCTGAGAGGCTTGTTTGGCTTTAAAGGATGAGGGGCAACTT
GAGAAAGACCTCAAAAAGCACAAAGAAGGATATGAGGGCGAAGGGAGTGG
AGGAGGAAGAAGGAGAGGGGAAAGAAGCAGAGGATGGTGTTGATGAGGAA
GATGCGGGGGAGTGAGTGGCAAAGGGGAGAATGAGCACTATTCCATCATA
ATTTCTCAATCTTAATTTTCTATAATTCGCATACTGCTGAAAGCTTTTGA
GGGTGCAAGAGTTTTGGACTCGGTTTGTTGTGTTTCGACTTCTAAGCATC
AGCATACTAGGCATTTCTGTCGTAGCTATCCTACAAACCTAGAACTATCA
TATGCAACCTCACGGCCTCTAGGAATTGCACAGAAGGGGAAGCCTTTCAA
CAATAAAATATTGCATATATTTCCCCTTATATTTTCCGAGTATTTGTAGC
GACTTTGACAGGTTTTACACCTAGCAAAGTCCCCGGACGGTCCAAACAGG
GCCAGGAGGAGGGGGGGGGGGGGGGAAGAGGAGGTCACAGGGGAGGCAAC
ACATAGAGTGTCCGCATATCCTGCCGCGGTTGACCATCATGGGGACGAGC
TTCTCCACGGACCATACTCCTGTACACCCTCAGAATGTTAAGTGCCCCAT
TGCCGTCCTGAGATGCAAACTGTTCACACGTCTCATACCAGCAAAGTCCT
CGGATGGCCGGCACGTAACCTCCTCCGCCTTCTCCGCCTTCTCTGCCTCC
TCCGCCTCCTCCGCCTCCTCATTCGCCTCGTCCTCCTCCTCTTTCTCTTC
CTCTTCCTCCGCCTCCGCCTCCTCCTGGAACTCCTCCTCCTCCTCCTCCT
CTTCCTCTTCCTCCTCCGTCCCTCCCTCCCCCTCTGCCTCCTCCTTCTCC
TACTATTGCTCCTCCTTCTTCTCTTCTCTCCACTCCTCCTTGTACCCTTC
CCCCTCCTCCTCCTTCTCTCCCTCCTCTCCCTCTCCCTCCTTCTCTCCCT
CCTCCTCCTTCTCTCCCTCCTCCTCCTGTGGGTGTGTGAGTGTGTGGCGC
GGTGTGTGGGTAGTTGTCGGGAGGGATGTGTGTCGGTGGGTGCAAATGAA
ACAGCCGCGTGGCACGCACGCTTGTCTAGGCTCTTGGGAGGAGGGGAAGG
CATTCTACTGCAACTTGTGAACCACTACCATGGTAGTGTAGCAGCTGTTG
TTCAACTTGCGACAAATGGCCTGGAGTAGCATGAACCCAAGGCCCTAGTA
TGCAAGCCTTATCCAGAATATCCCCAAAATCTCGTCACAATATTTTTTGA
CAAGAAGGGAGGAGGAGTCAAAGTTTGTACTTCCCTTGGGGTCCGGGACT
CGTTCGGAATTGAGGCGGGATGTGCTTACAATATCTAACATGCTGGCCAG
ATTTCATACCATGCTGTGTTTCTGCTTGGCTTACATCGAAGGCCTTATAC
GTGGGTTGTTGACGATAAAGCAGATGGGATTTTCCAGGACTTTCGGATAG
CGCCTGCCTTGTCGAGGGCGCATGTACAACCCATCGGAAAAACAGACGCA
CGCACTGGTGTCACTTTTTTGCTTCCGACATTTTCTCCCCATTTAAAAAG
TACCTAAGACCACCGGAACATGTATATATGTGATTATTATTATGCTAAGC
TCGCATTTATCGTGGTGCTTTGGTCAGCATTTGTGATATTTAAGTTGCTG
CACGGGAATCCTCGTTTTGATTTTGGACCATATTGGGGCGGCGCGCGGAC
CAACTACCCATCCAAAGATTTAGGGGGTCTGTCGGTGTGGAAAGGGGAGC
CATCAAGATTCATACCAACAGTTCAACTGCCCTTGTGCATGTGGAACCCA
TTAATTTGGAATTAATAACCATACTTTTGATTTTCTAACTGGAGATGGTT
GGCGAAAGCGAGAGAAACAGCCTCGGGGAAGATGGGCCGGCGCCGGTCTG
CTAGTGACCACAATAAAGAATGGAGCCAAAAGCCACCAAAAGCATTGAAG
GAGACGAGTTTAAAACTTTAAATATCTAGTTACGCATTTCCTTATCTTAT
GTTCTGTATTTTTGAATGCGAGAGCCCCCGTCGGACAAATATTGGGCCTC
CGACAGCTATTTGGAAATGTTGGGGCTAATTAGTTGGACAATTGGTGGAG
TGGATAACTATATCTATTTGGATCTGTCATTGAAAGTAAATACC
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protein sequence of NO04G03030.1

>NO04G03030.1-protein ID=NO04G03030.1-protein|Name=NO04G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=194bp
MGTSFSTDHTPVHPQNVKCPIAVLRCKLFTRLIPAKSSDGRHVTSSAFSA
FSASSASSASSFASSSSSFSSSSSASASSWNSSSSSSSSSSSSVPPSPSA
SSFSYYCSSFFSSLHSSLYPSPSSSFSPSSPSPSFSPSSSFSPSSSCGCV
SVWRGVWVVVGRDVCRWVQMKQPRGTHACLGSWEEGKAFYCNL*
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Synonyms
Publications