NO05G00940, NO05G00940 (gene) Nannochloropsis oceanica

Overview
NameNO05G00940
Unique NameNO05G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1892
Alignment locationchr5:287400..289291 -

Link to JBrowse

Properties
Property NameValue
DescriptionSoul heme-binding protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:287400..289291 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011256Reg_factor_effector_dom
IPR006917SOUL_haem-bd
Homology
BLAST of NO05G00940 vs. NCBI_GenBank
Match: EWM28188.1 (soul heme-binding protein [Nannochloropsis gaditana] >EWM28189.1 soul heme-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 535.0 bits (1377), Expect = 2.100e-148
Identity = 303/430 (70.47%), Postives = 337/430 (78.37%), Query Frame = 0
Query:    4 TAAAASGLLLLCRVDQGSAFLLPSASLAHSCRATASSLMRMEGTKAKEALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLTDGVKAVRRQLKEDIIPQLASEPQQAAKILLEELPKLAQRSYEGLPKNQKDLKQFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDPASYRIFQYNPPYTLPWLRRNEILVEVKGNVPSPGSSSSASSVADVAKSAATVMDETVTDQWAVRGDMELGETGNNAEDKDDVSPSDY 434
            T     GLLL   +D+  AF LPS       R   S+++R+E TK+K  LSWQESLELL+SPTT +AQRQVLFQDVVSRAPEIR DVEEAI EGS+DGLLTDG+KAVRRQL EDIIPQLASEP+QAAKILLEE+PKLAQRSYE LPKN K+L   A  LREVS++LP+EARNVFLRTPEGLETPSF+V+++G GY+IREYD YTVAYTEMG     + S S GPVLGSP MTGGAFNTLAGYIFGANEA  NMAMTTPVEIRK+A HRG GEAYSMRFI++S YTTETAPRP+D+KVRLTTT   ERLAAREFAGFATEGEVQRQLI+LLS LDRDGV VVDPASYRIFQYNPPYTLPWLRRNEILVEV+G  PS G+           K    V+ ET      V  + E GE        DD+SPSDY
Sbjct:   30 TRRVVVGLLLWDFLDRSGAFWLPSRL---PPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKEL---AETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTT-ARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGG-PSVGT----------VKMEEPVLVETT----LVNEEDEGGE--------DDLSPSDY 429          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: XP_005853692.1 (soul heme-binding protein [Nannochloropsis gaditana CCMP526] >EKU22663.1 soul heme-binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 506.1 bits (1302), Expect = 1.100e-139
Identity = 289/430 (67.21%), Postives = 325/430 (75.58%), Query Frame = 0
Query:    4 TAAAASGLLLLCRVDQGSAFLLPSASLAHSCRATASSLMRMEGTKAKEALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLTDGVKAVRRQLKEDIIPQLASEPQQAAKILLEELPKLAQRSYEGLPKNQKDLKQFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDPASYRIFQYNPPYTLPWLRRNEILVEVKGNVPSPGSSSSASSVADVAKSAATVMDETVTDQWAVRGDMELGETGNNAEDKDDVSPSDY 434
            T     GLLL   +D+  AF LPS       R   S+++R+E TK+K  LSWQESLELL+SPTT +AQRQVLFQDVVSRAPEIR DVEEAI EGS+DGLLTDG+KAV           LASEP+QAAKILLEE+PKLAQRSYE LPKN K+L   A  LREVS++LP+EAR VFLRTPEGLETPSF+V+++G GY+IREYD YTVAYTEMG     + S S GPVLGSP MTGGAFNTLAGYIFGANEA  NMAMTTPVEIRK+A HRG GEAYSMRFI++S YTTETAPRP+D+KVRLTTT   ERLAAREFAGFATEGEVQRQLI+LLS LDRDGV VVDPASYRIFQYNPPYTLPWLRRNEILVEV+G  PS G+                V +  + +   V  + E GE        DD+SPSDY
Sbjct:    5 TRRVVVGLLLWDFLDRSGAFWLPSRL---PPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAV-----------LASEPEQAAKILLEEMPKLAQRSYENLPKNPKEL---AETLREVSTALPSEARTVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTT-ARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGG-PSVGT--------------VKVEEPVLVETTLVNEEDEGGE--------DDLSPSDY 393          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: XP_002289619.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93156.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 198.0 bits (502), Expect = 6.100e-47
Identity = 136/370 (36.76%), Postives = 192/370 (51.89%), Query Frame = 0
Query:   47 TKAKEALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLT-------DGVKAVRRQLKEDIIPQLA-------SEPQQAAKILLEELP------------KLAQRSYEGLPKNQKDLK-----QFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTTP--------PGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDP----ASYRIFQYNPPYTLPWLRRNEILVEVK 374
            + AK + SWQE+LELL+ P T +A+RQ++  D+++   +I+  V  A+ +  +DGLLT       +G +AV RQL  DI+P +A       ++P+    +L E+LP             L  ++ + L + QKD++     +    L+E ++ +  EA+NVFL TPEGL  P + VV    GY+IREYD YTVA T M +     S D         A  G AFN LA Y+FGAN+    M MTTPV                MRF +       + P+P      +            PG  LA ++F GF TEGEV RQ  ALL++L  DG+ +  P      + IFQYNPPYT+P LRRNEI + V+
Sbjct:   84 SSAKASSSWQENLELLLLPDTPVAERQIVLSDLLNAGDQIQDSVRAALRDRKVDGLLTPTGKRLQEGSRAVARQLTSDILPGIAAVVASSSNKPKSPVDVLAEDLPTVVPKIGSRVLNALTNQAQKNLSELQKDVRAGDPFRSITRLQEQTAEIAQEAKNVFLETPEGLAGPPYTVVSQKDGYEIREYDGYTVASTSMSKVGEPYSMDDL-------ASGGEAFNALAAYLFGANDEKEVMEMTTPVTTTSTG---------EMRFYLRERDDNSSFPKPQVENDEVFNEKGAVNIQEIPGATLAVQKFTGFVTEGEVARQKDALLTSLAIDGIEIDVPHGKEVPHVIFQYNPPYTIPILRRNEIGIPVR 437          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: CEM21977.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 189.5 bits (480), Expect = 2.200e-44
Identity = 135/387 (34.88%), Postives = 199/387 (51.42%), Query Frame = 0
Query:   13 LLCRVDQGSAFLLPSASLA----HSCRATASSLMRMEG-TKAKEALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLTDGVKAVRRQLKEDIIPQLASEPQQAAKILLEELPKLAQRSYEGLPKNQKDLKQFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGAN------------------EANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGV-PVVDPAS--YRIFQYNPPYTLPWLRRNEILVEVK 374
            L C  D  S  +    SL      S R   S+ +R E    ++E ++W+E LE L+   T ++QRQ+L +D+V  APEIR ++ + +          + V+++RRQ+ EDI+P   SE  + A  LL  LP LAQR+    P     +++         ++L  E R+ F RTPEGLETP + ++Y    +++R+Y  Y +    M        ++           TG AF  LA Y+FG N                  +  + MAMTTPV I K        +  +M FI+ S YT +TAP P D  + +     G+ LA R+F+GFATEGE+ RQL  L  A+  +G   VVD +S  +++FQYNPP TLPWLR+NE+ V V+
Sbjct:   11 LACAADAASISITGFVSLVPRAMPSARRLRSTRLRAESQPSSQEPMTWEEKLEQLLKFDTPISQRQLLLRDLVQEAPEIRDEIRDTLVNAV---PRREDVESLRRQVVEDILPAARSEGPEVASRLLSSLPALAQRAVTMGPSMLTQVQKEGGL---PIATLIKEGRSAFQRTPEGLETPMYTLLYKVDEFEVRQYPEYAICTVRM-------DTEKDDRYTTDLLATGQAFRQLAAYLFGENRPKPMAQVTLGEAEPPAADKGVAMAMTTPVIIDKSV-----PKGATMSFILPSDYTLDTAPLPRDIDIDIEKA-GGDVLAVRDFSGFATEGEISRQLDKLRDAIALEGKWEVVDESSDAFKVFQYNPPQTLPWLRKNEVAVRVR 378          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: EJK46977.1 (hypothetical protein THAOC_34334 [Thalassiosira oceanica])

HSP 1 Score: 188.0 bits (476), Expect = 6.300e-44
Identity = 152/429 (35.43%), Postives = 211/429 (49.18%), Query Frame = 0
Query:   54 SWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLT-------DGVKAVRRQLKEDIIPQLAS------------EPQQAAKILLEEL----PKLAQRSYEGLP-------KNQKDLKQFAAALREV------SSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVD---------AKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPV----VDPASYRIFQYNPPYTLPWLRRNEILVEVKGNVPSPGSSSSASSVADVAKSAATVMDETVTDQWAVRGDMELGETGNNA-EDKDDVSPSD 433
            SWQE++E L+ P T +A+RQ++  D+V+ + EI+S VE A+ E +IDGLLT       +G KAV RQ+  DIIP LA+            + +   ++L+E+L    PK+  R +  +        +N +D  Q    LR +      +  +  EA+N+F  TPEGL  P +RVV    GY+IREYD YTVA T M         D     +   A  G AFN LA Y+FGAN+ +  + MTTPV                MRF ++ S      P PV           KV +   PP   LA   F GF TEGEV RQ  ALL+ L  DG+ +     +   + IFQYNPPYTLP LRRNEI + V           + ++  DV      V  + ++D+WA     E G  G  A E  ++  P++
Sbjct:   78 SWQENIETLLKPDTNIAERQIVLSDLVNSSDEIQSAVETALRERNIDGLLTPTQKRLQEGTKAVARQITSDIIPGLAAVAAGEKSPSSGRQVRNPVEVLVEDLPTVVPKIGSRVFNAIANQAQNNIRNLQDDIQSGDPLRSIERIQKQTEEIQKEAKNIFSETPEGLVGPPYRVVSVAEGYEIREYDGYTVASTSM------KKVDDEQFNMDDLASEGEAFNALAAYLFGANDKSEILDMTTPVTTTSSG---------QMRFYLNKS-GDSNFPEPVQENDEIFNEKGKVVVEDVPPA-TLAVARFTGFVTEGEVTRQKDALLTCLGIDGIEIDVEHGNVVPHVIFQYNPPYTLPVLRRNEIGIPV-----------TLTADDDV------VTADKLSDEWAQGIAAEDGNAGAEAGETSEESEPAE 472          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: XP_005711971.1 (unnamed protein product [Chondrus crispus] >CDF32306.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 174.5 bits (441), Expect = 7.300e-40
Identity = 121/331 (36.56%), Postives = 175/331 (52.87%), Query Frame = 0
Query:   47 TKAKEALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLTDGVKAVRRQLKEDIIPQLASEPQQAAKILLEELPKL---AQRSYEGLPKNQKDLKQFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDPA--SYRIFQYNPPYTLPWLRRNEILVEV 373
            ++ ++A SWQE L++L+ PT  +  +QVL QD+  RAPE+ +DV   +S      +   GV  V RQ +ED++P L S   +      E+ P        S  G+P           +  EV      E RN+F +TPEGL TP F+V+    GY+IR+Y +  +A T+M      ++S S    + S +  G +FN LAG++FG NE+   M MTTPV + K      G    +M FI+    + E  P+ +D  V+L     G+ LA  EF GF T+GE +RQ   L+  L RD + +   A  SY+   YN P TLP LRRNEI++EV
Sbjct:  140 SRKEKAASWQEELKMLLDPTMPVGVKQVLVQDLAKRAPEVFNDV---LSGKGCADIGLQGVADVIRQFQEDLLPDLVSNGPRYVAKAAEDFPNAISGMSSSSSGMPSKMPT----PVSPEEVQ----REFRNIFNKTPEGLFTPDFKVLGQFEGYEIRQYPTLIIAETKMTSE---TASASGATEVESASAMGQSFNNLAGFLFGKNESKTAMKMTTPVILSK------GEPEETMSFIIGEYDSVEAVPKTLDDTVKL-REQAGQVLAVSEFTGFVTQGEAKRQRKKLMDKLARDNIALGPDAESSYKCMIYNGPSTLPNLRRNEIMLEV 449          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: GAX11155.1 (hypothetical protein FisN_9Hh248 [Fistulifera solaris])

HSP 1 Score: 171.4 bits (433), Expect = 6.100e-39
Identity = 130/376 (34.57%), Postives = 182/376 (48.40%), Query Frame = 0
Query:   54 SWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLT-------DGVKAVRRQLKEDIIPQLASE--PQQAAKILL----------EELPKLAQRSYEGLPKN-QKDLKQFAAALREVSSSLP-----------TEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTT-----PPGERLAAREFAGFATEGEVQRQLIALLSALDRDG-----VPVVDPASYRIFQYNPPYTLPWLRRNEILVEVK--GNVPSPGSSSSAS 387
            SWQE L+  ++P T  A++QVL  D+     EI++ ++ A+ +G+ID LLT       +G +AV RQ+  DI+P LA    P   ++ L           E++ +L  R +  L    Q   K     L++ ++ +P            EA NVF  TP GL+ P ++VV     Y+IR+Y+ YTVA T M     G+      P   +    G AFN+LA Y+FGAN     + MTTPV                MRF + S+   +   +     V  T T      P  RLA R F GF T+GEV RQ  ALL+AL  DG     VP      + IFQYNPPYT+P +RRNEI V +     + +P S+   S
Sbjct:   62 SWQEDLDEFLNPMTPAARKQVLLSDLAGANSEIQASIQSALRDGTIDPLLTPRGKRLQEGTRAVARQVVSDILPSLAISFPPPSVSQGLFPPPPFPFPPAEDINRLGTRVFNALQNQIQTGFKNLQEDLQDPTTRIPQRLSQQTEEILQEAANVFSETPAGLKEPPYQVVATTEAYEIRDYEGYTVAITNM--MMTGTDDPYFTPNTNNLGEQGRAFNSLAAYLFGANRQKEVLDMTTPVTTTMSG---------EMRFYIDSNNPPDPLEQDESKNVYETDTIRIEEIPPARLAVRRFYGFVTQGEVARQKEALLTALALDGDYELDVPHGQTVKHLIFQYNPPYTIPVVRRNEIAVPISRVSEIETPESADRIS 426          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: GAX26946.1 (hypothetical protein FisN_9Lh248 [Fistulifera solaris])

HSP 1 Score: 170.6 bits (431), Expect = 1.000e-38
Identity = 138/395 (34.94%), Postives = 192/395 (48.61%), Query Frame = 0
Query:   37 TASSLMRMEGTKAKEALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLT-------DGVKAVRRQLKEDIIPQLASE--PQQAAKILL----------EELPKLAQRSYEGLPKN-QKDLKQFAAALREVSSSLP-----------TEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKVRLTTT-----PPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDPA-----SYRIFQYNPPYTLPWLRRNEILVEVKGNVPSPGSSSSASSVAD 391
            T+SS  +   TK K   SWQE L+  ++P T  A++QVL  D+     +I++ ++ A+ +G+ID LLT       +G +AV RQ+  DI+P LAS   P   ++ L           E++ +L  R +  L    Q  LK     L++ ++ +P            EA NVF  TP GL+ P + VV     Y+IR+Y+ Y VA T M     G+      P   + A  G AFN+LA Y+FGAN     + MTTPV                MRF + S    E   +     V  T T      P  RLA R F GF T+GEV RQ  ALL+AL  DG   +D A      + IFQYNPPYT+P +RRNEI V +   V    +  SA  +++
Sbjct:   54 TSSSATKDPITKNK---SWQEDLDEFLNPMTPAARKQVLLSDLAGANSDIQASIQSALRDGTIDPLLTPRGKRLQEGTRAVARQVVSDILPSLASSFPPPSVSQGLFPPPPFPFPPAEDINRLGTRVFNALQNQIQTGLKNLQEDLQDPTTRIPQRLSQQTEEILQEAGNVFSETPAGLKEPPYTVVATTEAYEIRDYEGYKVAITNM--MMTGTDDPYFTPNTSNLAEQGRAFNSLAAYLFGANRQKEVLDMTTPVTTTMSG---------EMRFYIDSINPPEPLEQDESKNVYETDTIRIEEIPPARLAVRRFYGFVTQGEVARQKEALLTALALDGDYELDVAHGQTVKHLIFQYNPPYTIPVVRRNEIAVPI-SRVSEVEAQESADRISE 433          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: XP_002176349.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42585.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 164.5 bits (415), Expect = 7.500e-37
Identity = 137/393 (34.86%), Postives = 188/393 (47.84%), Query Frame = 0
Query:   54 SWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLT-------DGVKAVRRQLKEDIIPQLASE----PQQAAKILLEELPK-----------LAQRSYEGLPKNQKDLKQFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSDSTGPVL-GSPAMTGGAFNTLAGYIFGANEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTT--ETAPRPV----------DAKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDP----ASYRIFQYNPPYTLPWLRRNEILVEV--KGNVPSPGSSSSASSVADVAKSAATVMDETVTD 406
            +W++ L+ L+ P T + +RQ LF DVVS   +IR  VE A+ +  ID LLT       DG +AV RQL  DI+P LA+     P Q   +  ++L K             Q++ + L ++  D  +  + + + +S    EA NV   TP GL+ P + +V     Y+IR+Y  Y V  T M            G V   S A +G AFNTLA YIFGAN  +  M MTTPV                MRF ++ +  T  +  P P+             + +   PP  RLA R F GFAT GE  RQ   LL+AL  D V +  P      + +FQYNPPYT+P LRRNEI V V     V +   ++S  S A  A  A++  D   +D
Sbjct:   74 TWKDDLDELLDPATEMNRRQALFTDVVSANQDIREAVETALRDRKIDPLLTPTGKKLQDGTRAVARQLSTDILPSLAANARNPPTQLFSVRPQDLQKNGNRFLNAVTNQMQQNLQTLQRDLLDPSRIPSRISQQTSEFVQEAANVLRETPVGLKEPPYTLVATTNEYEIRDYAGYKVVSTNMA---------PAGEVYRDSMAQSGQAFNTLASYIFGANRDSKVMEMTTPVTTTMSG---------EMRFYLAQNDETPDQRIPEPLAQDESKSVYETGNILIQDIPPA-RLAVRRFPGFATAGEQARQKEILLAALSLDDVELDVPHGQTVGHVLFQYNPPYTVPVLRRNEIAVPVVNPDAVDNDAENNSGESWASAAYDASSWDDGAPSD 447          
BLAST of NO05G00940 vs. NCBI_GenBank
Match: CEL96738.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 149.1 bits (375), Expect = 3.300e-32
Identity = 118/369 (31.98%), Postives = 178/369 (48.24%), Query Frame = 0
Query:   53 LSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSIDGLLTDGVKAVRRQLKEDIIPQLASEPQQAAKILLEELPKLAQRSYEGLPKNQKDLKQFAAALREVSSSLP-----TEARNVFLRTPEGLETPSFRVVYDGPGYDIREYDSYTVAYTEMGERALGSSSD---STGPVLG-----------------SPAMTGGAFNTLAGYIFGA----------------NEANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSY-TTETAPRPVDAKVRLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGV-PVVDPASYRIFQYNPPYTLPWLRRNEILVEVKGNVPS 379
            +SW+E ++ L+ P TT++QR VL QD++ +APEIRS++   +  G++      G  A+RRQ+  D++P LAS+  Q    ++  LP  +Q     LP   +       +LR V   LP      E +N   RTP+G+ETP + +      Y++R Y  Y++A  +MG  + G  +    +TG  LG                 + A  G +++   G +                    +  + M +TTP+ I +    R G  A  M F++ S Y     AP P D  V +    P E +A   FAGFATE E+QR+L  L   + RDGV  V D  ++R+  YN P  LPWLR NE+ V VK   P+
Sbjct:   74 MSWEEKIDHLLRPATTMSQRSVLAQDLLKQAPEIRSEIVSLLL-GAVPRRRDLG--ALRRQVLRDLLPTLASDMPQLTTKVVARLPTASQSVARSLPPLMR------RSLRAVRRGLPLAPLLREGKNALRRTPQGIETPRYSLERKVDEYEVRRYSGYSIASVKMGRVSPGKITTDLLATGTALGKLLAYYLGNNVPLGASTTAASNGTSYSGAMGMMNDTQIPAKRPPKPPTATTDTDGGVVMDLTTPIMIERT---RKG--ALYMTFVLPSEYQQVGRAPEPYDIAVSVQERLP-ETVAVLRFAGFATENEIQRRLEELKVEIARDGVFAVADDDAFRLHMYNGPQKLPWLRSNEVCVNVKRLKPA 427          
The following BLAST results are available for this feature:
BLAST of NO05G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28188.12.100e-14870.47soul heme-binding protein [Nannochloropsis gaditan... [more]
XP_005853692.11.100e-13967.21soul heme-binding protein [Nannochloropsis gaditan... [more]
XP_002289619.16.100e-4736.76predicted protein [Thalassiosira pseudonana CCMP13... [more]
CEM21977.12.200e-4434.88unnamed protein product [Vitrella brassicaformis C... [more]
EJK46977.16.300e-4435.43hypothetical protein THAOC_34334 [Thalassiosira oc... [more]
XP_005711971.17.300e-4036.56unnamed protein product [Chondrus crispus] >CDF323... [more]
GAX11155.16.100e-3934.57hypothetical protein FisN_9Hh248 [Fistulifera sola... [more]
GAX26946.11.000e-3834.94hypothetical protein FisN_9Lh248 [Fistulifera sola... [more]
XP_002176349.17.500e-3734.86predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CEL96738.13.300e-3231.98unnamed protein product [Vitrella brassicaformis C... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL084nonsL084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR122ngnoR122Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003785NSK003785Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00940.1NO05G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100004g11gene2276Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00940.1NO05G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00940 ID=NO05G00940|Name=NO05G00940|organism=Nannochloropsis oceanica|type=gene|length=1892bp
ATGCTCAAGACGGCTGCGGCAGCCTCTGGACTTCTGCTGCTCTGCCGTGT
GGACCAGGGCAGTGCTTTCCTCCTCCCCTCGGCCTCGCTAGCGCATTCGT
GCCGGGCTACCGCCAGCAGCTTGATGCGCATGGAGGGGACAAAGGCGAAA
GAAGCCTTATCATGGCAAGAATCCTTAGAGCTTCTCATCTCACCGACCAC
CACCCTGGCCCAGCGCCAGGTCCTTTTCCAGgtacgtgcacggcatgagt
agcgaaaatggacgatggattggagtggagtgcgcccacgcgcccctcct
aagcctgtatttccctatttccctttctcccaaggtactgaatatgttgt
ttgacatgttgatctgccatcccccaacctcacctcactccttcctccct
ctttacctcccaaccacctccaccaccagGACGTCGTCTCCCGCGCTCCC
GAAATAAGGAGTGACGTGGAGGAAGCCATCTCGGAAGGGTCCATTGACGG
GCTGCTGACTGACGGTGTCAAGGCTGTGgtacgtgcgtattctctcgctt
caatttatctctatcgaagcgagcttgttttgtcgttgcctcgttacata
cacacctctgatggaagcatcgtgcccacctctcatcttaaccccacaca
ctcacaaccaaccacctcagCGTAGACAGCTTAAGGAGGACATTATCCCG
CAGCTCGCTTCCGAGCCCCAGCAAGCAGCCAAAATACTCCTGGAAGAGCT
CCCCAAGCTCGCCCAGCGCTCTTACGAGGGTCTGCCCAAGAATCAAAAGG
ACgtacgtcactctgtcctgtccatccctccctccttccctcctcgcatc
ccttcatttcatatcgtccaccatcttttgcgtgctcccttcctctctct
caccacagTTAAAACAGTTCGCTGCCGCCCTCCGCGAGGTTTCCTCCTCC
CTGCCTACTGAAGCCCGTAACGTCTTCCTTCGTACACCCGAAGGCCTGGA
GACTCCTTCCTTCCGCGTTGTTTATGATGGACCAGGTTATGACATTCGAG
AATACGACTCCTACACTGgtaagtctccgaacctcactacgtcgctcgct
cccttgctccctcccctatctcccatctatcttcaatagagcagattgta
agcagctcaccttcccacccctctttgcctccccccttgcctccccccct
gttttctctaagTGGCTTACACCGAGATGGGCGAGAGGGCCCTTGGGTCC
TCCTCCGACAGCACGGGCCCCGTCCTCGGCAGCCCAGCCATGACGGGCGG
CGCGTTCAACACCCTCGCGGGCTACATTTTTGGCGCGAACGAGGCAAATA
TTAACATGGCCATGACCACGCCGGTGGAGATCCGAAAGGAAGCCCACCAC
CGTGGAGGGGGAGAAGCGTACAGCATGCGTTTTATCGTGTCCTCGTCTTA
CACGACCGAAACGGCTCCGAGGCCCGTTGACGCCAAGGTAAGGCTGACCA
CCACGCCGCCGGGGGAGCGATTGGCGGCCAGGGAGTTTGCGGGGTTTGCC
ACGGAGGGCGAGGTGCAACGACAGCTTATCGCGCTCTTATCGGCCTTGGA
TAGGGATGGTGTGCCTGTGGTGGACCCTGCCTCCTACCGCATTTTCCAGT
ACAACCCTCCCTATACTCTACCGTGGCTGCGACGGAACGAAATTTTGGTG
GAAGTCAAGGGGAATGTACCTTCTCCTGGCTCGTCCTCCTCCGCTTCCTC
GGTCGCAGACGTGGCGAAATCGGCGGCGACAGTTATGGACGAAACCGTGA
CAGACCAGTGGGCTGTGCGTGGTGATATGGAGCTAGGGGAGACGGGGAAC
AATGCGGAGGACAAGGATGATGTCAGCCCGTCCGATTATTAA
back to top

protein sequence of NO05G00940.1

>NO05G00940.1-protein ID=NO05G00940.1-protein|Name=NO05G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MLKTAAAASGLLLLCRVDQGSAFLLPSASLAHSCRATASSLMRMEGTKAK
EALSWQESLELLISPTTTLAQRQVLFQDVVSRAPEIRSDVEEAISEGSID
GLLTDGVKAVRRQLKEDIIPQLASEPQQAAKILLEELPKLAQRSYEGLPK
NQKDLKQFAAALREVSSSLPTEARNVFLRTPEGLETPSFRVVYDGPGYDI
REYDSYTVAYTEMGERALGSSSDSTGPVLGSPAMTGGAFNTLAGYIFGAN
EANINMAMTTPVEIRKEAHHRGGGEAYSMRFIVSSSYTTETAPRPVDAKV
RLTTTPPGERLAAREFAGFATEGEVQRQLIALLSALDRDGVPVVDPASYR
IFQYNPPYTLPWLRRNEILVEVKGNVPSPGSSSSASSVADVAKSAATVMD
ETVTDQWAVRGDMELGETGNNAEDKDDVSPSDY*
back to top
Synonyms
Publications