NO12G02090, NO12G02090 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G02090
Unique Name	NO12G02090
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1432
Alignment location	chr12:590417..591848 -

Link to JBrowse

Properties


Property Name	Value
Description	Pre-mrna splicing factor prp38

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:590417..591848 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005037	PRP38

Homology

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: EWM25823.1 (pre-mrna splicing factor prp38 [Nannochloropsis gaditana])

HSP 1 Score: 389.0 bits (998), Expect = 1.900e-104
Identity = 189/205 (92.20%), Postives = 194/205 (94.63%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAGWALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDEDLDPPEDGNEGW-KEKEDE 205
            MANRTDPTVTTVHGTNPQFL+EKILRQKIYNSLYWKEHCFGLTAETLVDKAVGL AYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAGWALKHMDE+IEELLT DYCCDVALPHLPKRHLLEDQKLL PR+SAL+DEDLD  E  NE   K+ EDE
Sbjct:    1 MANRTDPTVTTVHGTNPQFLIEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLKAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAGWALKHMDEFIEELLTSDYCCDVALPHLPKRHLLEDQKLLAPRISALDDEDLDTFEKDNETVDKQSEDE 205

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: OAE21836.1 (hypothetical protein AXG93_138s1070 [Marchantia polymorpha subsp. ruderalis] >PTQ29586.1 hypothetical protein MARPO_0138s0022 [Marchantia polymorpha])

HSP 1 Score: 279.3 bits (713), Expect = 2.200e-71
Identity = 133/187 (71.12%), Postives = 153/187 (81.82%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDPT  +VHGTNPQ LVEKILR KIY + YWKE CFGLTAETLVDKA+ L  +GG +GG +K T FMCL+LKMLQ+QPEKEIVVEFIKNEDYKY+R+LG FYLRLVGKP D+Y YLEPLYNDYRKLR +   G ++L H+DE+I+ELLT DY CD+ALP +PKR  LE    L PR SALED+
Sbjct:    1 MANRTDPTARSVHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHFGGTFGGNRKATPFMCLILKMLQIQPEKEIVVEFIKNEDYKYVRILGGFYLRLVGKPTDVYHYLEPLYNDYRKLRRKNADGSFSLDHVDEFIDELLTKDYSCDIALPRVPKRWTLEGSGTLEPRRSALEDD 187

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: GAQ82920.1 (pre-mRNA-splicing factor 38A [Klebsormidium nitens])

HSP 1 Score: 277.3 bits (708), Expect = 8.200e-71
Identity = 130/186 (69.89%), Postives = 152/186 (81.72%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALED 186
            MANRTDP    +HGTNPQ LVEKI+R KIY++ YW+EHCFGLTAETLVDKA+ L  +GG +GG +K T F+CL LKMLQ+QPEKEIVVEFIKNEDYKY+R+LGAFYLRLVGKP D+YQYLEPLYNDYRKLR +   G + L H+DE+I+ELLT D  CD+ LP LPKR+ LE    L PR+SALED
Sbjct:    1 MANRTDPRARNIHGTNPQNLVEKIVRSKIYSNTYWREHCFGLTAETLVDKAMELDHFGGTFGGNRKATPFLCLTLKMLQIQPEKEIVVEFIKNEDYKYVRILGAFYLRLVGKPTDVYQYLEPLYNDYRKLRQKTAEGKYILSHVDEFIDELLTRDSHCDITLPRLPKRYTLESAGTLDPRISALED 186

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: ABR16561.1 (unknown [Picea sitchensis])

HSP 1 Score: 276.2 bits (705), Expect = 1.800e-70
Identity = 134/187 (71.66%), Postives = 153/187 (81.82%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDP   +VHGTNPQ LVEKILR KIY + YWKE CFGLTAETLVDKA+ L  +GG +GG +K T FMCL++KMLQ+QPEKEIVVEFIKNEDYKY+R+LGA YLRLVGKP D+YQYLEPLYNDYRKLR +   G +AL H+DE+I+ELLT DY CDVALP +PKR  LE    L PR SALED+
Sbjct:    1 MANRTDPAAKSVHGTNPQNLVEKILRSKIYQNSYWKEQCFGLTAETLVDKAMELDHFGGTHGGNRKATPFMCLMMKMLQIQPEKEIVVEFIKNEDYKYVRILGALYLRLVGKPTDVYQYLEPLYNDYRKLRRKLADGSFALSHVDEFIDELLTTDYACDVALPRVPKRWTLEASGQLEPRRSALEDD 187

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: XP_024372546.1 (pre-mRNA-splicing factor 38-like [Physcomitrella patens] >PNR63215.1 hypothetical protein PHYPA_001640 [Physcomitrella patens])

HSP 1 Score: 275.8 bits (704), Expect = 2.400e-70
Identity = 134/185 (72.43%), Postives = 150/185 (81.08%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFR-GVAGWALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALE 185
            MANRTDPT  +VHGTNPQ LVEKILR KIY + YWKE CFGLTAETLVDKA+ L  +GG YGG +K T FMCL LKMLQ+QPEKEIVVEFIKNEDYKY+R+LGAFYLRLVGKP D+YQYLEPLYNDYRKLR R    G+ L  +DE+I+ELLT +Y CD+ALP +PKR  LE   LL  R SALE
Sbjct:    1 MANRTDPTARSVHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHFGGTYGGNRKATPFMCLTLKMLQIQPEKEIVVEFIKNEDYKYVRILGAFYLRLVGKPTDVYQYLEPLYNDYRKLRRRTSEGGYILARVDEFIDELLTTEYSCDIALPRVPKRWTLETTGLLDQRRSALE 185

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: EFJ35887.1 (hypothetical protein SELMODRAFT_404193 [Selaginella moellendorffii])

HSP 1 Score: 274.6 bits (701), Expect = 5.300e-70
Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDP   +VHGTNPQ LVEKILR+KI+ S +WKE CF LTAETLVDKA+ L   GG YGG +K T FMCL LKMLQ+QPEKEIVVEFIKN+DYKY+RVLGAFYLRLVGK  D+YQYLEPLYNDYRK+R R   G + L H+DE+I++LLT DYCCD+ LP +PKR +LE    L PR SALED+
Sbjct:    1 MANRTDPAAKSVHGTNPQNLVEKILREKIHQSSFWKEQCFALTAETLVDKAMELDHIGGTYGGNRKATPFMCLTLKMLQIQPEKEIVVEFIKNQDYKYVRVLGAFYLRLVGKATDVYQYLEPLYNDYRKIRQRSADGSFFLSHVDEFIDQLLTTDYCCDITLPRVPKRSVLEQNNQLEPRKSALEDD 187

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: XP_024515011.1 (pre-mRNA-splicing factor 38 [Selaginella moellendorffii] >XP_002989379.2 pre-mRNA-splicing factor 38 [Selaginella moellendorffii])

HSP 1 Score: 274.6 bits (701), Expect = 5.300e-70
Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDP   +VHGTNPQ LVEKILR+KI+ S +WKE CF LTAETLVDKA+ L   GG YGG +K T FMCL LKMLQ+QPEKEIVVEFIKN+DYKY+RVLGAFYLRLVGK  D+YQYLEPLYNDYRK+R R   G + L H+DE+I++LLT DYCCD+ LP +PKR +LE    L PR SALED+
Sbjct:    1 MANRTDPAAKSVHGTNPQNLVEKILREKIHQSSFWKEQCFALTAETLVDKAMELDHIGGTYGGNRKATPFMCLTLKMLQIQPEKEIVVEFIKNQDYKYVRVLGAFYLRLVGKATDVYQYLEPLYNDYRKIRQRSADGSFFLSHVDEFIDQLLTTDYCCDITLPRVPKRSVLEQNNQLEPRKSALEDD 187

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: XP_005648349.1 (PRP38-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE23805.1 PRP38-domain-containing protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 274.2 bits (700), Expect = 6.900e-70
Identity = 128/187 (68.45%), Postives = 154/187 (82.35%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDP   +VHGTNPQ LVEKILR KIY+S+YWKEHCF LTAE+LVDKAV L   GG +GG + PT+FMCL+LK+LQLQPEKEI+VEFIKNEDYKY+R+LGAFYLRLVG+PL++YQYLEPLYNDYRK+R R   G +AL HMDE I+++L  +Y  DVA+P +P R  +E   LL PR+S LED+
Sbjct:    1 MANRTDPDARSVHGTNPQNLVEKILRMKIYSSMYWKEHCFALTAESLVDKAVDLKYVGGTFGGQRAPTQFMCLMLKLLQLQPEKEIIVEFIKNEDYKYVRILGAFYLRLVGRPLEVYQYLEPLYNDYRKVRLRNADGNFALTHMDEIIDQMLYSEYLFDVAMPRIPNRVTMERLSLLEPRISVLEDD 187

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: XP_019173705.1 (PREDICTED: pre-mRNA-splicing factor 38 [Ipomoea nil])

HSP 1 Score: 273.5 bits (698), Expect = 1.200e-69
Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDPT  ++HGTNPQ LVEKI+R KIY + YWKE CFGLTAETLVDKA+ L   GG +GG +KPT FMCLV+KMLQ+QPEK+IVVEFIKNEDYKY+RVLGAFYLRL G  +DIY+YLEPLYNDYRKLR +   G + L H+DEYI+ELLT DY CD+ALP + KR  LE    L PR SALED+
Sbjct:    1 MANRTDPTAKSIHGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDIYRYLEPLYNDYRKLRLKSSEGKFTLTHVDEYIDELLTSDYSCDIALPRVKKRWTLESLGQLEPRRSALEDD 187

[Close]

BLAST of NO12G02090 vs. NCBI_GenBank
Match: XP_006344710.1 (PREDICTED: pre-mRNA-splicing factor 38 [Solanum tuberosum])

HSP 1 Score: 272.3 bits (695), Expect = 2.600e-69
Identity = 131/187 (70.05%), Postives = 153/187 (81.82%), Query Frame = 0

Query:    1 MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAG-WALKHMDEYIEELLTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDE 187
            MANRTDP   ++ GTNPQ LVEKILR KIY + YWKE CFGLTAETLVDKA+ L   GG +GG +KP+ F+CLV+KMLQ+QPEK+IVVEFIKNEDYKY+RVLGAFYLRL G  +DIY+YLEPLYNDYRKLR +   G +AL H+DEYI+ELLT DY CD+ALP + KR +LE  KLL PR SALED+
Sbjct:    1 MANRTDPLAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRKPSPFICLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDIYRYLEPLYNDYRKLRRKLADGQYALTHVDEYIDELLTTDYSCDIALPRIKKRWILEQNKLLEPRRSALEDD 187

The following BLAST results are available for this feature:

BLAST of NO12G02090 vs. NCBI_GenBank

BLAST of NO12G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25823.1	1.900e-104	92.20	pre-mrna splicing factor prp38 [Nannochloropsis ga...	[more]
OAE21836.1	2.200e-71	71.12	hypothetical protein AXG93_138s1070 [Marchantia po...	[more]
GAQ82920.1	8.200e-71	69.89	pre-mRNA-splicing factor 38A [Klebsormidium nitens...	[more]
ABR16561.1	1.800e-70	71.66	unknown [Picea sitchensis]	[more]
XP_024372546.1	2.400e-70	72.43	pre-mRNA-splicing factor 38-like [Physcomitrella p...	[more]
EFJ35887.1	5.300e-70	70.05	hypothetical protein SELMODRAFT_404193 [Selaginell...	[more]
XP_024515011.1	5.300e-70	70.05	pre-mRNA-splicing factor 38 [Selaginella moellendo...	[more]
XP_005648349.1	6.900e-70	68.45	PRP38-domain-containing protein [Coccomyxa subelli...	[more]
XP_019173705.1	1.200e-69	70.05	PREDICTED: pre-mRNA-splicing factor 38 [Ipomoea ni...	[more]
XP_006344710.1	2.600e-69	70.05	PREDICTED: pre-mRNA-splicing factor 38 [Solanum tu...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL126	nonsL126	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL125	nonsL125	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR014	ncniR014	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR008	ngnoR008	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR007	ngnoR007	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010141	NSK010141	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G02090.1	NO12G02090.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|556420	gene_5369	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100021g34	gene4695	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G02090.1	NO12G02090.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO12G02090 ID=NO12G02090|Name=NO12G02090|organism=Nannochloropsis oceanica|type=gene|length=1432bp
ATGGCAAACCGGACAGATCCCACGGTGACGACTGTACACGGTACGAACCC
ACAGTTTTTGGTGGAAAAGATTTTGCGACAAAAAATATACAACAGCCTTT
ATTGGAAGGAGCACTGCTTTGGGCTGACAGCCGAGACGCTTGTAGACAAG
GCCGTGGGGTTGAGTGCCTATGGCGGCCAGTACGGGGGTATGCAGAAGCC
CACAAAGTTCATGTGCTTGGTCCTGAAGATGCTGCAGCTCCAGCCCGAGA
AGGAGATCGTTGTGGAGTTCATCAAGAACGAGGACTACAAGTACTTGCGC
GTTCTGGGTGCATTTTACCTTCGCCTGGTGGGCAAGCCGCTGGATATCTA
CCAGTATCTGGAGCCCCTCTACAACGACTACCGCAAGCTTCGATTTCGGG
GCGTAGCGGGCTGGGCACTCAAGCACATGGACGAGTACATAGAGGAGCTG
CTGACGGGCGACTATTGCTGTGACGTAGCGTTGCCCCACCTGCCTAAGCG
GCACCTGCTCGAGGATCAGAAGCTCCTTACCCCCCGTGTCAGCGCATTGG
AGGACGAGGACCTGGATCCCCCGGAGGACGGAAACGAGGGGTGGAAGGAG
AAGGAGGATGAGGAGATGCGGAAAGCACGGAATGGTAAGAGCAGTCGACC
CCGGGGTGGCGATGAGGAGGAGCAGGAGGAGGATAAAGACGAGCAAGGGC
GGGAGAAATGGTTCAAGGATAGCCATCTGCACCGTCGAGGCAACCGCTTC
GCCTCGCCTTCCTCGCGTCATGAACGATGGCGGGACAGGCGGGGGAGGGA
CGAGGTGGAGGAGGATAGCATGGAAAATCGCCGCCGTCGAAACCGAAGTC
GGACTGCCAGTCGCACGCCTAAGCGCCGGCGTCGACGCTCCATGAGCCAA
GACCGCCGCCGTCGCAATCAATCGCCATCTCCATCATCATCATCATCATC
ATCATCATCATCATCATCATCATCATCATCATCGTCATCATCATCATCAT
CATCATCATCATCATCATCATCATCATCATCCCCCTCCTCCTTCTCCTCT
TCCTCCTCCTCCTCCTCTTTCTCCCCGACGAATCCCTCGCCTTCTCGAAA
AGACAGCAGCGACAGCGAATACGAGAGAAAGACCAAGAAAATCAAGAGCA
AGAAGGTGCGTGTGATCAAGGGGCTGAAGCTTCACAAGATCGTGGGGGGT
CACCGGCGGCGGCGACGGCAGCGGCTGCCGAGAGGGGCGGTAGTGGAGTT
CAGGGAGGAGGGGAAACATCCGTGGGAGAATGGAATGATATTAGGACGAA
GTTGGGTCTTAAGCCTTTGCGAGAgtaagaccagaagaagtcaaagcaaa
ggagaaaggaaaacatgcactgaaggttgccgaggcgatgtctttgccac
ctcgactttcagCATTTGCCGAGGAGACATAA

protein sequence of NO12G02090.1

>NO12G02090.1-protein ID=NO12G02090.1-protein|Name=NO12G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MANRTDPTVTTVHGTNPQFLVEKILRQKIYNSLYWKEHCFGLTAETLVDK
AVGLSAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLR
VLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAGWALKHMDEYIEEL
LTGDYCCDVALPHLPKRHLLEDQKLLTPRVSALEDEDLDPPEDGNEGWKE
KEDEEMRKARNGKSSRPRGGDEEEQEEDKDEQGREKWFKDSHLHRRGNRF
ASPSSRHERWRDRRGRDEVEEDSMENRRRRNRSRTASRTPKRRRRRSMSQ
DRRRRNQSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSSFSS
SSSSSSFSPTNPSPSRKDSSDSEYERKTKKIKSKKVRVIKGLKLHKIVGG
HRRRRRQRLPRGAVVEFREEGKHPWENGMILGRSWVLSLCETFAEET*

Synonyms

Publications